PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24488.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 227aa    MW: 25070.1 Da    PI: 5.904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.6e-053277251
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                +  + +rE+  Rd++N+ f +L e l  +    +  + Ka+iL+++++ +
  PIN24488.1 32 KIHKAAREKLKRDHMNDLFLNLSEALDLD----NSNNGKASILRETTRLL 77
                567789********************998....889999*****999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGSETADPVG DSVKASTRSG PSKKNPGNIP RKIHKAAREK LKRDHMNDLF LNLSEALDLD  60
NSNNGKASIL RETTRLLGEL LTQVDNLRKE NVTLSSESNY VTIERNELLE ETSALDAQIK  120
KLQREIDERT NCSNVDISQP QSNSATELPD NHVPFPLVGH GSESTPGVPV LIMPLHHESH  180
GFPSPFTEVN LPKAPPTVSR PRPRYPSSSD SWPPQIVTKP MDMVEDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.21e-31bHLH family protein