PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24215.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 371aa    MW: 42427.4 Da    PI: 8.6791
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.95.1e-15192293199
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 f+k+l++sdv+ ++r+vlpk+ ae++   ++++e++ l++ d +g  +W +k++y  +++s++yvl+  + +Fv  +gL   D ++ +  ++ +++++v
  PIN24215.1 192 FKKQLKNSDVGGLRRMVLPKRDAETYlpVLETKEGIPLSMLDMDGiHEWWFKFRYwpNNSSRMYVLE-STGDFVYTHGLVPDDYILVY--QNiEDGRYV 287
                 89**************************666778889********9*******99888999999999.9***************9999..788999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 + +++k
  PIN24215.1 288 IEARKK 293
                 999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MNEHCTNVTS DRSILAKFRT IKITNPLLLL IIRAHLPHSP IALLLSLSFS LFPQETLSSP  60
PLPPLLKNFH SLLKRRKKKK KRKKEKKMER NEASNFSGNG KGLMGSSSNG IAAVRGEDRR  120
TSTRLQRNQQ EQRRESSIGA DLFSGPGFNV QRGPRMRRSR RATLDSLTFP ALHVPPLPPP  180
RGIDISKLCY LFKKQLKNSD VGGLRRMVLP KRDAETYLPV LETKEGIPLS MLDMDGIHEW  240
WFKFRYWPNN SSRMYVLEST GDFVYTHGLV PDDYILVYQN IEDGRYVIEA RKKEECDTPR  300
ISNDLAMKET TDDLTLYALP SLDETEMLYG YDTTYLDDSP LDYLGDSINL PSLGSNSSFE  360
AIEDYNDEDF E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17280LLKRRKKKK
27387LKRRKKKKKRKKEKK
37480KRRKKKK
47482KRRKKKKKR
57581KRRKKKK
67583KRRKKKKKR
77581RRKKKKK
87585RRKKKKKRKKE
97586RRKKKKKRKKEK
107682KRRKKKK
117684KRRKKKKKR
127686RRKKKKKRKKE
137687RRKKKKKRKKEK
147787KKKKKRKKEKK
157783KRRKKKK
167883KKKKRK
177884KRRKKKK
187987KRRKKKKKR
198084KKRKK
20157197RRSRRATLDSLTFPALHVPPLPPPRGIDISKLCYLFKKQLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-51B3 family protein