PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24134.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 607aa    MW: 66648.8 Da    PI: 4.7953
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.76.9e-1092426073374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 ++L+ecA+ +s++d e+a + L rl+el+s++gdp++R+  yf eAL +r+++   ++ k+ +  +t+   s+e + ++k+f++++P+ kf+hltaNqa
  PIN24134.1 242 KALIECAR-LSESDPENAVKSLIRLRELVSQKGDPLERVSYYFSEALYSRVSH---QTEKTATIYDTT---SEEFTLSYKAFNDACPYSKFAHLTANQA 333
                 79******.67779**************************************9...555555556665...88999*********************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Ilea+e+++++Hi+Df+i qG+QW+a+lqaLa+Rp+g+p ++ i g+ +   g   + +l +tg+rL++fA+ l+++fef+  v + +++l+ +++rv+
  PIN24134.1 334 ILEATEKAQKIHIVDFGIVQGIQWAAFLQALATRPSGKPeRVLISGIPARGLGdsPAASLLATGNRLRDFAKLLDLNFEFQS-VLTPVQELNGSSFRVD 431
                 ***********************************777769********7776889999***********************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 p+E+laVn++lql++lldes +  +     Lkl ksl+P vv++ e e+++n+  Fl+rf +al+yy+a+f+sle +l+r+s er  vEr llgr+i  
  PIN24134.1 432 PDEVLAVNFMLQLYNLLDESNEGVE---GALKLAKSLNPCVVTLGEYEVSLNRVGFLHRFKNALKYYTAVFESLEPNLARDSPERLQVERLLLGRRIAG 527
                 *****************98888777...9********************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaWr 374
                 vv  e+++ rer+e +e+Wr  +e+aGF+p+ +s++a++qa+ ll k++ s  y++ ++   g l l W+d pL++vS+Wr
  PIN24134.1 528 VVGPEEQK-RERMEDKESWRFLMEAAGFEPLIFSHYAMSQANILLWKYSnSSFYKLVDSspPGFLSLAWNDVPLLTVSSWR 607
                 ******98.9***************************************77779999762245566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIK QKQQQEHQQQ QHQQQLLTIN PFCLTTWPSV STSATAAAAA  60
GHQQTPTSSS LSYGLTSGFA DPFQVPAGPE TGEAGFQFPN LDHHSTGFRF SDLCGGPGGE  120
FDSDEWMESL MGGGDSTESS NLQTDCDAWQ TSSEFSHLYP TDPFPSRLSI NSSPPSDLNR  180
VIFSDPPQTS AWVPSSSAPL PAAQPTALQE SKPAIIKDDV AATAGASTSS PEASPKAKPI  240
LKALIECARL SESDPENAVK SLIRLRELVS QKGDPLERVS YYFSEALYSR VSHQTEKTAT  300
IYDTTSEEFT LSYKAFNDAC PYSKFAHLTA NQAILEATEK AQKIHIVDFG IVQGIQWAAF  360
LQALATRPSG KPERVLISGI PARGLGDSPA ASLLATGNRL RDFAKLLDLN FEFQSVLTPV  420
QELNGSSFRV DPDEVLAVNF MLQLYNLLDE SNEGVEGALK LAKSLNPCVV TLGEYEVSLN  480
RVGFLHRFKN ALKYYTAVFE SLEPNLARDS PERLQVERLL LGRRIAGVVG PEEQKRERME  540
DKESWRFLME AAGFEPLIFS HYAMSQANIL LWKYSNSSFY KLVDSSPPGF LSLAWNDVPL  600
LTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein