PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 230aa MW: 25420.4 Da PI: 4.5035 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 52.9 | 7.1e-17 | 21 | 59 | 22 | 59 |
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PIN24098.1 21 RGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 59 99*****998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MISLVNKKVN SSFVARVYEY RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW 60 PTQRNALAGS TRSQPSKTTN NTSKTSPNSQ AQKPTNPKEE KNEISTENAV TSSSTNSAAV 120 KEETDQDFDN QLENMDDAEF NEGFPQTYKP TLPDSNHTED NFFADLGEIE GDPLDLLFIQ 180 GFSGDVGREN KDLDPFSFYD WAANTSNITS AATTTTTASS AASYGDATRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 3e-40 | WRKY family protein |