PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24097.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 278aa    MW: 31973.7 Da    PI: 4.4986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-09156200655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  ++ r+RR++i ++ +eL +l+P  +      +++ ae+L+ A +YIk Lq
  PIN24097.1 156 TIAARQRRRKISEKTQELGKLIPGgN------RMNTAEMLQSAYKYIKFLQ 200
                 5778*******************955......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MAMSSYYSNR DTSQYEFNSD ISSLSQTETQ LIPPELFINN FELSDPFCNN IDYLFETNDL  60
FNSENFDSLF PDLSTPPYYN LNSTSQEFEP FHCPKRQKTT KTYEPFYSNF NVPEPDFING  120
LLDYEPELII PPLPDLPTAS PAYNKPPSGG SLSAQTIAAR QRRRKISEKT QELGKLIPGG  180
NRMNTAEMLQ SAYKYIKFLQ AQVEILQLMG STYYKENETE ELHGFLESRL VQEKLYSNEK  240
CLVSWKLVEE VANDSQFIES KPQVASELRK LARTNPSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.16e-28bHLH family protein