PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24069.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 406aa MW: 44826.7 Da PI: 6.5632

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	137	182	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ PIN24069.1 137 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 182 899***************************.*********996 PP
2	Myb_DNA-binding	56.3	7.6e-18	189	232	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l a++++G++ W+ Iar ++ gRt++ +k++w+ PIN24069.1 189 RRAFTEEEEERLMAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 232 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MASKNFSVIY SPPNNTNSNC SSPFLSSSSS SCSALGPSMV GMVFSDMRTL SINHNIGISS 60 QERDNPSFSR MGFSGFDETH NSEGKCSDSS DIFGENNEMI DLNASLNEED QDQDSYMHAL 120 SGKDGNNASG QSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF 180 NQLDPRINRR AFTEEEEERL MAAHRLYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE 240 QSSAHRRRKM GQFVFKRMED DEINGSAAIK TEPPLSSFGG GGLLYHSVAG GDGVFCGSIG 300 SNHLVSGGVA TPNNTGFWAP QTSIGFFPGP SSTSDLMSIF NDGKTWDETN SYPTNHHHPF 360 LMSSIQQQSQ YHHYPLNFTS SSEAVVPAAE EKIPPPFIDF LGVGAL

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MASKNFSVIY SPPNNTNSNC SSPFLSSSSS SCSALGPSMV GMVFSDMRTL SINHNIGISS  60
QERDNPSFSR MGFSGFDETH NSEGKCSDSS DIFGENNEMI DLNASLNEED QDQDSYMHAL  120
SGKDGNNASG QSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF  180
NQLDPRINRR AFTEEEEERL MAAHRLYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE  240
QSSAHRRRKM GQFVFKRMED DEINGSAAIK TEPPLSSFGG GGLLYHSVAG GDGVFCGSIG  300
SNHLVSGGVA TPNNTGFWAP QTSIGFFPGP SSTSDLMSIF NDGKTWDETN SYPTNHHHPF  360
LMSSIQQQSQ YHHYPLNFTS SSEAVVPAAE EKIPPPFIDF LGVGAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-75	MYB family protein