PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24001.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 332aa    MW: 37150.2 Da    PI: 9.874
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.67.3e-32181235358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p+YVNa+Qy++Il+RRq+Rakle+++kl  ksrkpylheSRh+hAl+R+RgsgGrF
  PIN24001.1 181 PIYVNARQYHAILRRRQTRAKLEAQNKL-PKSRKPYLHESRHRHALKRARGSGGRF 235
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MKHYTMQNLS NKETARTTAD SYATLFGSRS SLWFSTKQPQ QSVDTELENT AGHHHHVKLS  60
EAQYQEQDSS STLSSEKSHH ESATSVRSNF HVQNISFQPG SFENYKKKGD DYVSPSLPKA  120
DCGSHQVQME HNPSLATISY PLAGSYLSRI TVAYEPNATV YPVGIEPARI VLPLDYAEGI  180
PIYVNARQYH AILRRRQTRA KLEAQNKLPK SRKPYLHESR HRHALKRARG SGGRFLNTKN  240
TQQKKTSPQT YDKSLSLRST SEAEIQHSES NSWGTSTTSG SDVSCIFNND DIFHQPNLRV  300
SISSLSMGPT TPIGAHSRRI SIDRCARISS VT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220229RHRHALKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.23e-36NF-YA family protein