PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YB | ||||||||
Protein Properties | Length: 139aa MW: 15839.7 Da PI: 6.2607 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 148.5 | 1.4e-46 | 3 | 98 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 e+d++lPianv+rimk++lP +akisk+ake +qec+sefisf+tseasd+c++e+rkt+ngdd++wal+++G+++y +++ yl+k re e+++ PIN23943.1 3 DEHDKLLPIANVGRIMKQILPPHAKISKEAKERMQECASEFISFITSEASDRCHKENRKTLNGDDICWALCSVGLDNYSDAMLRYLQKLREYERQR 98 589******************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MTDEHDKLLP IANVGRIMKQ ILPPHAKISK EAKERMQECA SEFISFITSE ASDRCHKENR 60 KTLNGDDICW ALCSVGLDNY SDAMLRYLQK LREYERQRAY QSNLVSTGED KDETSTTNWA 120 TFDFGILDRR GSTSSGKPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 2e-51 | NF-YB family protein |