PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23787.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 264aa MW: 27279.8 Da PI: 7.8154

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128.7	2.6e-40	38	138	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdP+yG+v++i++lqqq+ +l+ael++l+ PIN23787.1 38 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPIYGCVAHIFALQQQVVNLQAELSYLQ 136 7*********************9989******************************************************************999 PP DUF260 99 ee 100 ++ PIN23787.1 137 AH 138 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSASNVPGSS TAVGGGGGSS SGSGSGGGGG GGGGGGGPCG ACKFLRRKCV AGCIFAPYFD 60 SEQGAAHFAA VHKVFGASNV SKLLLHIPVH KRLDAVVTIC YEAQARLRDP IYGCVAHIFA 120 LQQQVVNLQA ELSYLQAHLA ALELPIPPPA APAPPPPQGP QQPLFVPPPA QSISDLPAVA 180 ATYDLSALFD NVVHPSWALQ QRQQIDPRQF STTTATAARA PPEIQSPTSS GDDLQELARE 240 LLNRHSPPAM PCRNQASNLP SQSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	2e-71	LBD family protein