PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23678.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 316aa    MW: 34409.7 Da    PI: 6.7468
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.9e-14128174354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  PIN23678.1 128 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 174
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQQQNSTADA YIGVGGGGGG GSTLTFPEVS QILPWTLPPV HGFNPVHFST RDHDPFLLPP  60
PAPPSYGGLF NRRPSGLQFG YDGGSSDHHL RLISEVVHPS SAPFGLHAEL QKMTAQEIMD  120
AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH VKELKRQTSI  180
IAETSPVPTE IDELTVDNAS DEDGKPVIKA SICCEDRSDL LPDLIKTLKA LRLRTLKAEI  240
TTLGGRVKNV LFITGEDQDS NNNGTAEGEL QQQQYSISSI QEALKAVMEK SNGDESGSGS  300
VKRQRTNINI LEHRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134139ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-80bHLH family protein