PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 26500.9 Da PI: 4.5913 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.2 | 4.6e-06 | 186 | 211 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 h ++Er+RR+++ ++f L +++P + PIN23613.1 186 HIIAERKRREQLSQRFVALSTIVPGL 211 899*********************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDSSEMSWLS EMGLDNSIFM DQCDFMDSFD EEVAAVLGQD FENCLSAGNN SSSSSTLINI 60 PSTNSINSLC TNSPPTDNNM ASEPPAKLQK PNNFSNFSTV QTLPNPDRAS SAPIILNFGN 120 STEINPQQIV NPSRPLNPDE EAAVSEVLRS QGSFVEPEEQ PKRAPAMTAT TKKTSRVRPP 180 SQTYDHIIAE RKRREQLSQR FVALSTIVPG LKKIIIPLPL NIDLIMKILH AVREIIIIIS 240 S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 190 | 195 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.1 | 4e-08 | bHLH family protein |