PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23514.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 481aa MW: 52988.1 Da PI: 4.8892

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.4	3.6e-36	21	113	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ ++sws+++nsfvv++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i+ PIN23514.1 21 FLSKTYDMVDDPATDAVVSWSKSNNSFVVWNVPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGHKHLLKSIN 108 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PIN23514.1 109 RRKPS 113 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEGGGGGVGG VSAAATSPPP FLSKTYDMVD DPATDAVVSW SKSNNSFVVW NVPEFARDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGH KHLLKSINRR KPSHAQGQPQ 120 PAQVQNPSVG SCIEVGKFGI EEEVERLKRD KNVLMQELVR LRQQQQSTDN QLQTVGQRVH 180 VMEQRQTQMM SFLAKAMQSP GFVAQLVHQQ NDNNRQISGG NKKRRLPNQD EENLACKYSI 240 TSPDGQIVKY QPQMNEAAKS MLRQILKMNT SGRLESKLSN SSGFFIDNVH PPSNVLDSGS 300 SSDRMSVVTL SEVLSNTAGQ AETQSSAGLA NGKAHPTMFP EANSALPDLF PAQGINPENN 360 TDLNNGTFKG VESTDLECGE TIPGFVDAPM PAASDELLAD DDVEVLLDDI HKLPGINDVF 420 WEQFLSGSPL MGDTDEINTV NLEYGTGKGQ EMEQEGEWDR LKNLNNLTEQ MGLLASASRI 480 G

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEGGGGGVGG VSAAATSPPP FLSKTYDMVD DPATDAVVSW SKSNNSFVVW NVPEFARDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGH KHLLKSINRR KPSHAQGQPQ  120
PAQVQNPSVG SCIEVGKFGI EEEVERLKRD KNVLMQELVR LRQQQQSTDN QLQTVGQRVH  180
VMEQRQTQMM SFLAKAMQSP GFVAQLVHQQ NDNNRQISGG NKKRRLPNQD EENLACKYSI  240
TSPDGQIVKY QPQMNEAAKS MLRQILKMNT SGRLESKLSN SSGFFIDNVH PPSNVLDSGS  300
SSDRMSVVTL SEVLSNTAGQ AETQSSAGLA NGKAHPTMFP EANSALPDLF PAQGINPENN  360
TDLNNGTFKG VESTDLECGE TIPGFVDAPM PAASDELLAD DDVEVLLDDI HKLPGINDVF  420
WEQFLSGSPL MGDTDEINTV NLEYGTGKGQ EMEQEGEWDR LKNLNNLTEQ MGLLASASRI  480
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-143	HSF family protein