PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23382.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 238aa MW: 25075 Da PI: 5.6335

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.1	5.4e-37	66	159	6	89
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.............k 89 ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++ +a++ +++ss ++ ss+ + PIN23382.1 66 SSTKDRHTKVNGRGRRVRIPALCAARVFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTAPAEAISTSSSIIQS---SSAsavvsspmpvtepQ 159 689*********************************************************99999666333333333...33312232222222220 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MSSSDMAFNE DFSSNTHLSV PPPNYNLTPA PAVAPDAAVN TQPLTANVPA ATRPRVVSRR 60 VASGGSSTKD RHTKVNGRGR RVRIPALCAA RVFQLTRELG HRSDGETIEW LLRQAEPSII 120 AATGTGTAPA EAISTSSSII QSSSASAVVS SPMPVTEPQP VPPSANPVPT ASNSSMVTAP 180 PPPEPSYRLD TSQPQASAPL MAVDFTNACR NMPFMALLFQ PASLDDLDNF SGFDEDNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-27	TCP family protein