PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23276.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 989aa MW: 109856 Da PI: 7.0574

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.7	5.2e-41	152	229	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvCe+hska+ +lv +l+qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ PIN23276.1 152 VCQVEDCKADLSNAKDYHRRHKVCEAHSKATRALVGNLMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 229 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 989 aa Download sequence
MDTKFSGKAH HLYGPVVSDL NGVTQKSVEW DLNDWRWDGD MFMAAPVNSA PSDCRSRQFF 60 PVGSDIPLNN RTPNSFSSES AEAVLGDERE TRDLEKRRRY IERNELVNEE AGSLNLKLGG 120 EVFPVTESNI DKWEEKSGKK SKLSGAPSSR AVCQVEDCKA DLSNAKDYHR RHKVCEAHSK 180 ATRALVGNLM QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NKRRRKTHPE NVVSAATLNN 240 EQGSSNLLIS LIRILSNIAS SSSDQTRDQD LLSHLLRNLA NLAGPINERN PAGSLPVSPD 300 LQNVGTSLGN GVKDLPGPTE PGVTVPLSNL ARKSTVTDNA QVGAAHDASV SRQSHLLFPE 360 KARDSLRKNA SDTTVGKAKL NNIDLNNVYD SSQDCMENMQ DSVAPENLGN VSTTVPLWLC 420 KDSQRSSPPQ NSGNSGSTRS HSTSTSSGEA QSRTDRIVFK LFGKDPSDFP LDLRKQILDW 480 LSSSPTDIES YIRPGCIVLT IYASMDKSTW EELYCNLNSS MRRLLDSSTD SFWRTGWIYA 540 RVPHRATFVY NAQVVLDTPL PLNHQSCRIS SITPIAVSFS EGVHFVVKGF NLSHPTSRLL 600 CALEGNYLIQ ENCADMIGRA ADTFVEHEEV QCLSFSCAMP NIVGRGFIEV EDNGLSCSFF 660 PFIVAEKDVC SEICDLESII EVTESADGET NKAQARNQAL DFVHEMGWLL HKSRLILRLG 720 ETSVDMDLFP FTRFRWLIEF AIDHDWCAVV KKLLSIFFYG TVDPGQHASM LVALLDIGLL 780 HRAVRKNSRS MVEFLLEYHA SEAVDKTGPK EKQPAMGPYL FRPDTIGAGG LTPLHIAASL 840 DNCENVLDAL TEDPGSVGIE AWKNVRDSMG LTPYDYACLR GHYSYIHLVG QKLKKKSGNG 900 QVVVDMKQKI AKMGALQTDQ RTHCRQCEQK LAYGSMRASS SIKIYRPAML SMVAIAAVCV 960 CAALLFKSSP EVLYSFRPFR WELLKYGSE

Sequence ? help Back to Top

Protein Sequence Length: 989 aa Download sequence

MDTKFSGKAH HLYGPVVSDL NGVTQKSVEW DLNDWRWDGD MFMAAPVNSA PSDCRSRQFF  60
PVGSDIPLNN RTPNSFSSES AEAVLGDERE TRDLEKRRRY IERNELVNEE AGSLNLKLGG  120
EVFPVTESNI DKWEEKSGKK SKLSGAPSSR AVCQVEDCKA DLSNAKDYHR RHKVCEAHSK  180
ATRALVGNLM QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NKRRRKTHPE NVVSAATLNN  240
EQGSSNLLIS LIRILSNIAS SSSDQTRDQD LLSHLLRNLA NLAGPINERN PAGSLPVSPD  300
LQNVGTSLGN GVKDLPGPTE PGVTVPLSNL ARKSTVTDNA QVGAAHDASV SRQSHLLFPE  360
KARDSLRKNA SDTTVGKAKL NNIDLNNVYD SSQDCMENMQ DSVAPENLGN VSTTVPLWLC  420
KDSQRSSPPQ NSGNSGSTRS HSTSTSSGEA QSRTDRIVFK LFGKDPSDFP LDLRKQILDW  480
LSSSPTDIES YIRPGCIVLT IYASMDKSTW EELYCNLNSS MRRLLDSSTD SFWRTGWIYA  540
RVPHRATFVY NAQVVLDTPL PLNHQSCRIS SITPIAVSFS EGVHFVVKGF NLSHPTSRLL  600
CALEGNYLIQ ENCADMIGRA ADTFVEHEEV QCLSFSCAMP NIVGRGFIEV EDNGLSCSFF  660
PFIVAEKDVC SEICDLESII EVTESADGET NKAQARNQAL DFVHEMGWLL HKSRLILRLG  720
ETSVDMDLFP FTRFRWLIEF AIDHDWCAVV KKLLSIFFYG TVDPGQHASM LVALLDIGLL  780
HRAVRKNSRS MVEFLLEYHA SEAVDKTGPK EKQPAMGPYL FRPDTIGAGG LTPLHIAASL  840
DNCENVLDAL TEDPGSVGIE AWKNVRDSMG LTPYDYACLR GHYSYIHLVG QKLKKKSGNG  900
QVVVDMKQKI AKMGALQTDQ RTHCRQCEQK LAYGSMRASS SIKIYRPAML SMVAIAAVCV  960
CAALLFKSSP EVLYSFRPFR WELLKYGSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	100	EKRRRY
2	222	228	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein