PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23228.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 538aa MW: 58007.1 Da PI: 5.3401

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.1e-06	355	403	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er R++i +++ L++l+P + sk Ka +L + ++Y++sLq PIN23228.1 355 NSHSLAERVSREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 403 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MDVGDKDTTV EPQKGSDDPV NYPAPNMSSD WQVNGNNLTN TSIGMIPVGN SMVETSACSS 60 APMVDSFCAP VWDQPIGGQN LGYGDVNCQT DASTSSGLGP VRADMGWTPN AMMRGSMFLP 120 TVPGALPQSL PHFPDSAFIE RAARFSCFSG GNLGEMMNPF SIHDPLNPYS RGLALMQGPQ 180 EVFGGSILKP LNGMQSQRHE MNMTEVSKDG LITGKHGTEG SPFKNEKKSE TVMRSHDEAK 240 RGVGAAGNES VEAEFSGRGT QEELQGTVGE LSGIGLGSQK RKRGGQDTDH DENNEMPQPS 300 IEMAKESVEI KQKGDQNPTS VTKPSGKNGN QGSQGSDTPK DEYIHIRARR GQATNSHSLA 360 ERVSREKISE RMKFLQDLVP GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPRL 420 DFNIEGLLAK DILQPRAGMP CSLAFPPDMT MPFPPLHLPQ PGLIQPCLPG NSSETFRRPI 480 NLQSPAVCGV FKEPTSQVPG VWEDELHNVV HVGFNSSAPL NSQDLSGSAP PHHMKAEP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MDVGDKDTTV EPQKGSDDPV NYPAPNMSSD WQVNGNNLTN TSIGMIPVGN SMVETSACSS  60
APMVDSFCAP VWDQPIGGQN LGYGDVNCQT DASTSSGLGP VRADMGWTPN AMMRGSMFLP  120
TVPGALPQSL PHFPDSAFIE RAARFSCFSG GNLGEMMNPF SIHDPLNPYS RGLALMQGPQ  180
EVFGGSILKP LNGMQSQRHE MNMTEVSKDG LITGKHGTEG SPFKNEKKSE TVMRSHDEAK  240
RGVGAAGNES VEAEFSGRGT QEELQGTVGE LSGIGLGSQK RKRGGQDTDH DENNEMPQPS  300
IEMAKESVEI KQKGDQNPTS VTKPSGKNGN QGSQGSDTPK DEYIHIRARR GQATNSHSLA  360
ERVSREKISE RMKFLQDLVP GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPRL  420
DFNIEGLLAK DILQPRAGMP CSLAFPPDMT MPFPPLHLPQ PGLIQPCLPG NSSETFRRPI  480
NLQSPAVCGV FKEPTSQVPG VWEDELHNVV HVGFNSSAPL NSQDLSGSAP PHHMKAEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-104	bHLH family protein