PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22959.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 280aa    MW: 30608.5 Da    PI: 8.1952
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.17.4e-12556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l  +v+++G g Wk I r          R+  ++k++w+++
       PIN22959.1  5 KQKWTAEEEEALRAGVAKHGAGKWKNIQRDPEfnhllFARSNIDLKDKWRNL 56
                     79******************************99*9977***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGNPKQKWTA EEEEALRAGV AKHGAGKWKN IQRDPEFNHL LFARSNIDLK DKWRNLSVAN  60
GQGPRDKSKT PKAKVSPADA PATPVPIAQT SASVAPSSQD ASTDVVMLDS SRPLPEGNNA  120
AKYNAMIYEA LSSLKEPNGS DSGSIANFIE QKHEVPQNFK RVLSSRLRRL VQQDKLEKVQ  180
NCYKIKKGAL ADTKTPAARQ KDQPQPRPVH SIGYLGDTVE EAAVSAAYKI AEAENKSFVA  240
AESVKEAERV SAMAEDMESL LQFAIDCFEQ SAYGEILLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-65MYB_related family protein