PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22861.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 328aa    MW: 35291.3 Da    PI: 5.0026
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1171.1e-36251162102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF++++F++g+k ll++i+
    PIN22861.1  25 FLTKTYQLVDDSSIDDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDYFRRGEKALLKDIQ 112
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PIN22861.1 113 RRKI 116
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSGESTGGGG ASSGGESQRS IPTPFLTKTY QLVDDSSIDD LISWNEDGTT FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDYF RRGEKALLKD IQRRKISTGA  120
AAAAAVSTAA VTANAQSVTV AVAPATAIHI SPANSGDEQV LSCNSSPAAT AAATAPSPPP  180
LRACASAPEI LEENDRLRRE NSQLSKELNR LRSLCGSIYN LMSSYATNQG EAVLPEGKVL  240
ELMPEARAPA DDEYCAAVRG GGWKAEEVDG EDMCPRIFGV SIGGIKRMRT SEDGKGDDLT  300
VSRGPDVKSE PLDSASSQNH DTPRLDKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.16e-86HSF family protein