PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22825.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 506aa MW: 55375.9 Da PI: 4.5215

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	118	5.5e-37	35	126	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d+++++++sws ++nsfvv+d+ efak++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i PIN22825.1 35 FLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDSAEFAKELLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKSIS 122 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PIN22825.1 123 RRKP 126 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
METASTSSTI TKGGDGGGPA PAPAPMPASN APPPFLVKTY DMVDDPSTDK IVSWSPTNNS 60 FVVWDSAEFA KELLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQKHLLKS 120 ISRRKPAHGH PPHQQQTNAQ SSAVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ 180 QTTDAQLQAM VQRLQGMEQR QQQMMAFLAK AVNSPGFLAQ FMQQPNDNNR SIMEGSKKRR 240 LKQEGVSDDD SFSPSDGQIV KYQPMMNEAA KAMLRQIVKL DSSSSLENFE KASDSFLNSS 300 SNRVSGVTLQ EVPPTSGPSI VPSTSAIKGN SSAVITEVQS PSLGASAEVA ANQFSGKIGT 360 QEMPPISLPA ADAILPELSQ MVPESNVDII GSEAEAGVFM DQTSFPVSGE IPLDVGDFSP 420 NPQMEWDNSL LDEIQELPGV SDSFWEKFLQ SPPPVEAEMD STLTDDLPEG GETKPLENGW 480 NKSEHMAKLT EQMGLLSSDA QKVFDT

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

METASTSSTI TKGGDGGGPA PAPAPMPASN APPPFLVKTY DMVDDPSTDK IVSWSPTNNS  60
FVVWDSAEFA KELLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQKHLLKS  120
ISRRKPAHGH PPHQQQTNAQ SSAVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ  180
QTTDAQLQAM VQRLQGMEQR QQQMMAFLAK AVNSPGFLAQ FMQQPNDNNR SIMEGSKKRR  240
LKQEGVSDDD SFSPSDGQIV KYQPMMNEAA KAMLRQIVKL DSSSSLENFE KASDSFLNSS  300
SNRVSGVTLQ EVPPTSGPSI VPSTSAIKGN SSAVITEVQS PSLGASAEVA ANQFSGKIGT  360
QEMPPISLPA ADAILPELSQ MVPESNVDII GSEAEAGVFM DQTSFPVSGE IPLDVGDFSP  420
NPQMEWDNSL LDEIQELPGV SDSFWEKFLQ SPPPVEAEMD STLTDDLPEG GETKPLENGW  480
NKSEHMAKLT EQMGLLSSDA QKVFDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-121	HSF family protein