PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22650.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 320aa    MW: 34121.1 Da    PI: 9.4287
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-13108152347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r   k+Rt+ q+ s+ qky
       PIN22650.1 108 PWTEEEHKLFLIGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 152
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSLCSESPSA AVSGGGSASD GSDGSGGGEF MLFGVRVKID PMRKSVSMNN LSEYEPVNNT  60
SNPSDKSGGE LGKEVAAAES GGAVGYASAD DAVPQPSNGS RERKRGVPWT EEEHKLFLIG  120
LQKVGKGDWR GISRNYVKTR TPTQVASHAQ KYFLRRSNLN RRRRRSSLFD ITTDSVTGMQ  180
TEEGRNHHDI PVQPVPLPTT VPPLPVRSNI NGSSVVPCPI NVGPFPLSMQ GATPAENTAP  240
VQNRRLNNSS TTLVRPVPVP QMPAPSTMVD LNLNQQMSLD PSPLSLGLSL SSRQDHSSAR  300
DSAFQVVSGY KNGDNIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-47MYB_related family protein