PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22628.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 348aa MW: 38762.9 Da PI: 8.9245

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	3.9e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ +++ PIN22628.1 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPWELPAKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTAgGTQ 112 79**************************.88***********7777899**********************************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl PIN22628.1 113 KVGVKKALVFYGGKPPKGIKTSWIMHEYRL 142 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MESTDSSGGS QQPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVAIIAEV DLYKFDPWEL 60 PAKAIFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTAGG TQKVGVKKAL 120 VFYGGKPPKG IKTSWIMHEY RLADNKPVNN KPPGCDVANK KGSLRLDDWV LCRIYKKNNA 180 QRPMDLERDD INDMIGPIQP TIPMPIVQQQ KLKASNYSSV LEHDHNLYKG LIGNDSINSH 240 LVSSGSKPPH LPFMTADTNL LPSKRPLPTL YWNEEEGNPN SPPTKRFLVE GCDDSIGRTD 300 ETTNSIATIL GHLPQTPNSM QQQGMIGSIG DGVFKQQQYQ VSGMNWYT

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MESTDSSGGS QQPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVAIIAEV DLYKFDPWEL  60
PAKAIFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTAGG TQKVGVKKAL  120
VFYGGKPPKG IKTSWIMHEY RLADNKPVNN KPPGCDVANK KGSLRLDDWV LCRIYKKNNA  180
QRPMDLERDD INDMIGPIQP TIPMPIVQQQ KLKASNYSSV LEHDHNLYKG LIGNDSINSH  240
LVSSGSKPPH LPFMTADTNL LPSKRPLPTL YWNEEEGNPN SPPTKRFLVE GCDDSIGRTD  300
ETTNSIATIL GHLPQTPNSM QQQGMIGSIG DGVFKQQQYQ VSGMNWYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-124	NAC family protein