PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22524.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 488aa MW: 53839.4 Da PI: 7.0952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.6e-13	310	355	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YIk+L PIN22524.1 310 NHVEAERQRREKLNHRFYALRSVVPNV-----SRMDKASLLSDAVSYIKEL 355 799*********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDDLIVSPSS SSSILPSVSH QQLPATLQKK LQYILQTQPD WWAYTILWHT SKDDNGRIFL 60 TWGDGHFQGT KEKNPKSGSQ PERKKVMRGI QALIGENTDM SGPADGDVTD AEWFYVMSLA 120 QSFSLGDGVV GKAFNSGSLV WLSGGNQLRF YNCQRAKEAQ IHGMQTMVCI PTLNGVLELG 180 SDVIITENWS LVQQVKSLFE SSSSSDPTNN SGSAHGGVQQ FTGKTISFSD AAVTAAGYQQ 240 GAKTTVSLVK KQEASNNSNN KAQKAEILSY LDSEHSDSDC QFFLDAHVET KRTPKKRGRK 300 PNLGRDTPLN HVEAERQRRE KLNHRFYALR SVVPNVSRMD KASLLSDAVS YIKELRSKVE 360 DLESQLQRET SCKKVKTETA DTLDNQSTTT SVDQVGSMSM ISSSSITSSL DVEVKIVGAD 420 GMIRVQSDNG NYPAARLMNA IRDLELQVHH ASMSCVNDLM LQDVVIRVPD GLRCENALRT 480 ALVRRLEQ

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDDLIVSPSS SSSILPSVSH QQLPATLQKK LQYILQTQPD WWAYTILWHT SKDDNGRIFL  60
TWGDGHFQGT KEKNPKSGSQ PERKKVMRGI QALIGENTDM SGPADGDVTD AEWFYVMSLA  120
QSFSLGDGVV GKAFNSGSLV WLSGGNQLRF YNCQRAKEAQ IHGMQTMVCI PTLNGVLELG  180
SDVIITENWS LVQQVKSLFE SSSSSDPTNN SGSAHGGVQQ FTGKTISFSD AAVTAAGYQQ  240
GAKTTVSLVK KQEASNNSNN KAQKAEILSY LDSEHSDSDC QFFLDAHVET KRTPKKRGRK  300
PNLGRDTPLN HVEAERQRRE KLNHRFYALR SVVPNVSRMD KASLLSDAVS YIKELRSKVE  360
DLESQLQRET SCKKVKTETA DTLDNQSTTT SVDQVGSMSM ISSSSITSSL DVEVKIVGAD  420
GMIRVQSDNG NYPAARLMNA IRDLELQVHH ASMSCVNDLM LQDVVIRVPD GLRCENALRT  480
ALVRRLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-80	bHLH family protein