PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22314.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 500aa MW: 55274.8 Da PI: 6.7011

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.8	4e-11	186	242	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + ++ ++ k + g ++ +++Aa+a++ a++k++g PIN22314.1 186 SQFRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEDKAARAYDLAALKYWG 242 789****************433.44555535555.7799999***********98 PP
2	AP2	46.7	7.9e-15	287	336	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PIN22314.1 287 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 336 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MPLRSDSSFS VLDSKHYWRY DNDMNGPNQN EEAPKFEDFL GCCYSNSPPN EPGEINMNMP 60 PNLSSACDDH KGENFTTPSL YFQPYNYSVA AANPEGVYFG GAVADGGGDG GTSGSGFKSW 120 FPHTEKPVVE GSRICDFQTL SLTVSHSSQP DIPTAVADGK KRVAAKSSVK EPVPRKSIDT 180 FGQRTSQFRG VTRHRWTGRY EAHLWDNSCR KEGQTRKGRQ GGYDKEDKAA RAYDLAALKY 240 WGPTTHINFP LSTYEKELEE MKNMSMQEFV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ 300 ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGTSAV TNFDISRYDV KRICSSSTLI 360 AGDLAKRSPK DTVGPSSVED YNSCASSASP QAFLRITNGE SNSDELAEMM WNASSDEQGS 420 QNEQPAKDNS RPGPGSRCSS GPPSPKRSDM GPARMDDEFS QAYYSLEGQK YVDGSDHMSS 480 NRVPDMGLVH QAPIFALWND

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MPLRSDSSFS VLDSKHYWRY DNDMNGPNQN EEAPKFEDFL GCCYSNSPPN EPGEINMNMP  60
PNLSSACDDH KGENFTTPSL YFQPYNYSVA AANPEGVYFG GAVADGGGDG GTSGSGFKSW  120
FPHTEKPVVE GSRICDFQTL SLTVSHSSQP DIPTAVADGK KRVAAKSSVK EPVPRKSIDT  180
FGQRTSQFRG VTRHRWTGRY EAHLWDNSCR KEGQTRKGRQ GGYDKEDKAA RAYDLAALKY  240
WGPTTHINFP LSTYEKELEE MKNMSMQEFV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ  300
ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGTSAV TNFDISRYDV KRICSSSTLI  360
AGDLAKRSPK DTVGPSSVED YNSCASSASP QAFLRITNGE SNSDELAEMM WNASSDEQGS  420
QNEQPAKDNS RPGPGSRCSS GPPSPKRSDM GPARMDDEFS QAYYSLEGQK YVDGSDHMSS  480
NRVPDMGLVH QAPIFALWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-128	AP2 family protein