PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 372aa MW: 41469.9 Da PI: 6.9508 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+t++r g+ R++k+c++rw +yl PIN22286.1 14 RGLWSPEEDEKLINHITTYGHGCWSTVPRLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T++E l++++++ lG++ W+ Ia++++ gRt++++k++w+ PIN22286.1 67 RGNFTPQEAALIIELHRILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 89********************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MTHHTCCNKQ KVKRGLWSPE EDEKLINHIT TYGHGCWSTV PRLAGLQRCG KSCRLRWINY 60 LRPDLKRGNF TPQEAALIIE LHRILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLAHH 120 HHLRNNTNNA SSSDLATTFG SNPSNSCSGT EKLDNNIIPN PQMDHQMIKN GQIERQICIS 180 TPPSLPLEGF DIPLESNQVT NYSLNLALLP SHSIPISSAS GMNSWPIDQI QNQNHDNFIF 240 PFETSAPSVL NFNQEMQAYD QDSAMLDALM PELSEMAKVI EFGVPSSSFM QEQVLDYPHG 300 GLVSGFPSGL DSRYIPQHPN HINNIASLMA SFVLPESGAT FATLPASFLA PLPWFSPSLA 360 NSYVPSAWAP QP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 2e-74 | MYB family protein |