PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22206.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 330aa MW: 37484.2 Da PI: 8.681

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.5e-05	103	126	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F ++ +L++H++ H PIN22206.1 103 HPCSLCGEIFQNPALLQQHQSIkH 126 78******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MLSIRSFFSN FTSFLILLLF YLGCFTFSSS HHRRSRHSFK KRLTPPKPNL LSFLKNLFSS 60 SKSIPQAPPS IPSPSSSTRS LRLNPSITVI PPEDHITHSV FIHPCSLCGE IFQNPALLQQ 120 HQSIKHPVSE LIDGENIVRI IFNMSWPDKV RRPTIHRILK IHNSPRTISR FEEYRDWVKS 180 RAESKAFKNT LKDERCIADG NELLRFYCTT FICDLDSCLC NQQYCNVCGI IRSGFSPKID 240 GISMLPTSWR AHASIPDDLE EEFSFMRVKR ALILCRVIAG RVGFEPGLVD KEDSGFDSFV 300 GHGSGGSDDN ELLVFNPRAL LPCFVIVYTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	6e-84	C2H2 family protein