PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21970.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 794aa MW: 88464.2 Da PI: 9.3898

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.2	2.6e-19	702	782	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev+++i++r e+++r++ k +++lWee+s+ ++++g++rs+ qCk+ w +l ++y++ k+ +k ++++pyf++++ PIN21970.1 702 KWKPEEVKKMIKMRGELNSRFQVVKGRMALWEEISSSLSSEGINRSAGQCKSLWASLVQKYEESKNDAKA-----QKSWPYFEDVN 782 7**************************************************************99997.....356**9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MQTKPKCIYF DNICLKMAAL SAISVVPHKL FRCQPKPRRR FISCCVSIPA LKGSQGSKVP 60 RRRSGRTEGA GRSMEDSVKR KMEQFYEGSN GPPLRILPIG GLGEIGMNCM LLGNYDRYIL 120 IDAGVMFPDY DELGVQKIIP DTTFIKKWSH KIEAVIITHG HEDHIGALPW VIPALDARTP 180 VFASSFTMEL IKKRLKEFGI FVPSRLKVFK TRRKFVAGPF EVEPIRVTHS IPDCSGLVFR 240 CADGTILHTG DWKIDESPLD GQVFDREALE ELSKEGVTLV KVEDIDAYAP KDLLIVTTGS 300 QGEPRAALNL ASFGSSHSLK LNKEDLILYS AKVIPGNETR VMEMLNRISE IGSTIVMGRN 360 SLLHTSGHAH REELDEVLKI VKPQHFLPIH GELLFLKEHE LLGKSTGIRH TAVIKNGEML 420 GVSHLRNRRV LSNGFISLGK ENLQLMYSDG DKAFGTATEL CVEERMRIAT DGIIVVSMEI 480 MRPQAAGGSV EKALKGKIRI TTRCLWLDKG KLLDALHKAA HAALSSCPVS CPLAHMERTV 540 SEVLRKMVRK YSSKRPEVIA IAIENPAAVL ADEINGKLSG KSHINSEMAA LRKAVDGHEK 600 TRRPIELLEE DGNGLALAGS TTEQDLEDHD YDKLLETDPK IDKSDEFWKS FRSPSMSNPL 660 EVNSDLFPKA KQIQKGKDES TGLDSGLQKS RPKPSKSGKR NKWKPEEVKK MIKMRGELNS 720 RFQVVKGRMA LWEEISSSLS SEGINRSAGQ CKSLWASLVQ KYEESKNDAK AQKSWPYFED 780 VNNILSQLET KASK

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MQTKPKCIYF DNICLKMAAL SAISVVPHKL FRCQPKPRRR FISCCVSIPA LKGSQGSKVP  60
RRRSGRTEGA GRSMEDSVKR KMEQFYEGSN GPPLRILPIG GLGEIGMNCM LLGNYDRYIL  120
IDAGVMFPDY DELGVQKIIP DTTFIKKWSH KIEAVIITHG HEDHIGALPW VIPALDARTP  180
VFASSFTMEL IKKRLKEFGI FVPSRLKVFK TRRKFVAGPF EVEPIRVTHS IPDCSGLVFR  240
CADGTILHTG DWKIDESPLD GQVFDREALE ELSKEGVTLV KVEDIDAYAP KDLLIVTTGS  300
QGEPRAALNL ASFGSSHSLK LNKEDLILYS AKVIPGNETR VMEMLNRISE IGSTIVMGRN  360
SLLHTSGHAH REELDEVLKI VKPQHFLPIH GELLFLKEHE LLGKSTGIRH TAVIKNGEML  420
GVSHLRNRRV LSNGFISLGK ENLQLMYSDG DKAFGTATEL CVEERMRIAT DGIIVVSMEI  480
MRPQAAGGSV EKALKGKIRI TTRCLWLDKG KLLDALHKAA HAALSSCPVS CPLAHMERTV  540
SEVLRKMVRK YSSKRPEVIA IAIENPAAVL ADEINGKLSG KSHINSEMAA LRKAVDGHEK  600
TRRPIELLEE DGNGLALAGS TTEQDLEDHD YDKLLETDPK IDKSDEFWKS FRSPSMSNPL  660
EVNSDLFPKA KQIQKGKDES TGLDSGLQKS RPKPSKSGKR NKWKPEEVKK MIKMRGELNS  720
RFQVVKGRMA LWEEISSSLS SEGINRSAGQ CKSLWASLVQ KYEESKNDAK AQKSWPYFED  780
VNNILSQLET KASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein