PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21839.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 378aa MW: 43667.3 Da PI: 8.3107

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.7	1.6e-19	177	223	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll ++v+++G + W+tIa++++ gR +kqc++rw+++l PIN21839.1 177 KGQWTPEEDGLLMKLVEKHGVRKWSTIAQMLP-GRIGKQCRERWHNHL 223 799***************************.***********97 PP
2	Myb_DNA-binding	59.5	7.5e-19	229	271	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++rW++eEd +l++a++qlG++ W+ Iar+++ gR+++ +k++w+ PIN21839.1 229 KDRWSEEEDRILIEAHRQLGNK-WAEIARRLP-GRSENTIKNHWN 271 68******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDFDTLPKDY NPALYPKLFE ETLYTPQMDH NEATNFNSSL SQLYNPSKVL GNLDHNLIME 60 GSLSSNPFSI FGSSFYDPFD PFQAPFGKLN QEFSTPFAQD GAPLLHGSQS KRFLEVDSSR 120 SSFQTMDQYN LDCPKMSSEL VEAKQGTSDH HQTMNIAKNK MITKRKRIVD KKSDIVKGQW 180 TPEEDGLLMK LVEKHGVRKW STIAQMLPGR IGKQCRERWH NHLKPNIKKD RWSEEEDRIL 240 IEAHRQLGNK WAEIARRLPG RSENTIKNHW NATKRRQLSS RKTKNSKINT PLQNYIKSVI 300 LTSDHNEKCY ADISSSGSTS PTDNIAMEKS KKICLNMIKD ENDHSVEESY KFLDAQMHIQ 360 SDLQKEMDFM EMISYGYI

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDFDTLPKDY NPALYPKLFE ETLYTPQMDH NEATNFNSSL SQLYNPSKVL GNLDHNLIME  60
GSLSSNPFSI FGSSFYDPFD PFQAPFGKLN QEFSTPFAQD GAPLLHGSQS KRFLEVDSSR  120
SSFQTMDQYN LDCPKMSSEL VEAKQGTSDH HQTMNIAKNK MITKRKRIVD KKSDIVKGQW  180
TPEEDGLLMK LVEKHGVRKW STIAQMLPGR IGKQCRERWH NHLKPNIKKD RWSEEEDRIL  240
IEAHRQLGNK WAEIARRLPG RSENTIKNHW NATKRRQLSS RKTKNSKINT PLQNYIKSVI  300
LTSDHNEKCY ADISSSGSTS PTDNIAMEKS KKICLNMIKD ENDHSVEESY KFLDAQMHIQ  360
SDLQKEMDFM EMISYGYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	3e-64	MYB family protein