PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21792.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 332aa    MW: 35369.5 Da    PI: 6.24
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1770119255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  PIN21792.1  70 RYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 119
                 59****999.**********954...5999*******************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSGAAISDPN HHLPQEDNVN NNDHHHPIPP LSSTTTTTTD SVATSSGGGN TSNNNKKGKG  60
KGGPDNSKFR YRGVRQRSWG KWVAEIREPR KRTRRWLGTF ATAEDAARAY DRAAIILYGS  120
RAQLNLQPSG CGGAAGGSGG GSSSQSSSRT SSSSLSSTQT LRPLLPRPAG FGLTFSTPPP  180
PANYAQYGLY PSAQYPNLVP QLAPQQVVGM LYGNNHELRV EGDPTNTIRD TSDTTSSYPN  240
PNCNDYNTQQ QQQNQNLQCV GYDDISSLVG SVGSSLSIAS TEPVAAAPAI SDPAAVMDGY  300
ATSPSWPLLP SDEDYPPTSI WDYSDPFLFD SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-28ERF family protein