PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21724.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 279aa    MW: 30087.3 Da    PI: 7.7139
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.74.1e-111054345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d+++ +a++ ++ +   +W++Ia+ ++ g++ +++k+++ 
       PIN21724.1 10 VWSREQDKQFERAIAAYPEDtcdRWEKIAADVP-GKSVEEIKHHYE 54
                     7********************************.**********96 PP
2Myb_DNA-binding42.12e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
       PIN21724.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MPADESSSSV WSREQDKQFE RAIAAYPEDT CDRWEKIAAD VPGKSVEEIK HHYELLVDDV  60
NRIESGAVQV PCYNPSTDGS ISHAGDEGSG KKCGSFGHSN SDSNHGGKSS RSDQERRKGI  120
AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS  180
IHDITSVNSG DISVPQGPIT GQTNGSAVGG PSAKSNKQPP QAPGVSMYGA PTIGQPIGGP  240
LVSAVGTPVN LPPQPHVAYG APINMAPMTY PLPNTSAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-118MYB family protein