PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21564.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 432aa MW: 47195.7 Da PI: 8.8057

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.6	6.1e-05	318	356	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq PIN21564.1 318 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 356 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MESANAHRHL RDQLLYVPSS SSSSSPPSLA TSPCYGVGTA TTNPWSTPIS FLNTNGFSTS 60 YPTETFLNSR ETRPGLHQEN RTTTLLLSSQ YANSMAPDLG TFHWSNTTTA QSGQDLHLSR 120 IKLEELSQHY YCNYNNNSGH QLSNEQRPLL QPNDDLNTRL FLKSVSYGNE NIMNNKIQLS 180 PTGDINLHSS SGRGFSQIFP SINISNLNNQ PAASASLDIN LEALDLLACS RFSGNFGHSS 240 VNHIGLLRDG FSYGSFDHIH QSHQFPFCGS NKVSASSNGV VEAKRSSSKM EQTKAPVQNA 300 PKKTRLEARA SCPPFKVRKE KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLQSQVE 360 TLSVPYMKAS RNKSSTRVMK GGPTHEQESE EPKQRDLKSR GLCLVPLPCL SYITDGGGAA 420 AVWPPPHFGG AT

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MESANAHRHL RDQLLYVPSS SSSSSPPSLA TSPCYGVGTA TTNPWSTPIS FLNTNGFSTS  60
YPTETFLNSR ETRPGLHQEN RTTTLLLSSQ YANSMAPDLG TFHWSNTTTA QSGQDLHLSR  120
IKLEELSQHY YCNYNNNSGH QLSNEQRPLL QPNDDLNTRL FLKSVSYGNE NIMNNKIQLS  180
PTGDINLHSS SGRGFSQIFP SINISNLNNQ PAASASLDIN LEALDLLACS RFSGNFGHSS  240
VNHIGLLRDG FSYGSFDHIH QSHQFPFCGS NKVSASSNGV VEAKRSSSKM EQTKAPVQNA  300
PKKTRLEARA SCPPFKVRKE KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLQSQVE  360
TLSVPYMKAS RNKSSTRVMK GGPTHEQESE EPKQRDLKSR GLCLVPLPCL SYITDGGGAA  420
AVWPPPHFGG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	5e-61	bHLH family protein