PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN21488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | C2H2 | ||||||||
Protein Properties | Length: 243aa MW: 26415.4 Da PI: 6.5044 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.4 | 0.00011 | 99 | 121 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksF++ L H +H PIN21488.1 99 YQCKTCNKSFPSFQALGGHRASH 121 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.0005 | 155 | 177 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H PIN21488.1 155 HECSICGAEFASGQALGGHMRRH 177 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MQSEEEVIMI KGKRSKRPRP PSPFVLTIAT NSSTTAEFTA VTAGGVITDD SGSSDRVTPS 60 PSNSGARTDE EEEDMANCLI LLARGHRQTP PPPPASEVYQ CKTCNKSFPS FQALGGHRAS 120 HRIKPNKQED DSTINLLLQI PNRVLSNHQN KSRLHECSIC GAEFASGQAL GGHMRRHRPI 180 PAAASSGSYG DQSQEVKRPR IVLSLDLNLP APEEDDCSES DFGYGPKEQV IVFSTSSLVD 240 CHY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 16 | 20 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03510.1 | 3e-44 | C2H2 family protein |