PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21376.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 849aa MW: 94491.8 Da PI: 6.5482

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.3e-18	310	410	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l+++ PIN21376.1 310 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLLMG 406 99************************555567778***********99899999999.*******************876.88888888 PP EE-S CS B3 96 vfrk 99 ++++ PIN21376.1 407 FRKA 410 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MESRVCMNGL CANSSNSVEW KKGWPLRSGG FATLCDDCGT AYEQLIFCET FHSEETGWRE 60 CTSCKKRLHC GCIASSSLLE LLDTGGVHCR GCSKSSKLPS TPLEEKHKAC GLSTDNGIDQ 120 NFDKMAPAQS DDNAQKDGQE HVPPSQNDDT TPRKLEEDFA GSGEIGFKLF SSFNQSSVVP 180 PKDQDTLRDS KSDGSEHKSL VQTNLSISLS ASSNLNTLPG AIAEERQLSA SISSFQQGCR 240 PRHVLPRLPN SILPAGLETN SSTITQLRVA RPPVEGRVKN QLLPRYWPRI TDQELQQISG 300 DSNSTIIPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QPEGLPLRIQ DVKGKEWIFQ 360 FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRMDPE GKLLMGFRKA SSTLSVQKDS 420 HYSMNSGAFQ GEQLLGNAEN LPMMSGYSGL LQSLKETRAS SMTLLSKHVY PGNISPHIIE 480 KNVSQSMGLP ERKRRNIGPK SKRLLIDGQD SLELRLSWEE VQEMLRPPPR VEPSTIMVED 540 HEFEEFEEPP VFGKRSIFIV RLSGEQEQWT QCDSCFKWRK VPIDFLLPHK WTCQDNVTDQ 600 MRSSCSAPDE LSSRELEILL RMNKDFTKRR VQTSLKQESQ DLETLTNAAP VGVETNEPGS 660 SSVGPTTKHP RHRPGCSCIV CIQPPSGKGK HKPTCVCNVC MTVKRRFKTL MMRKKKRQSE 720 REAEIAQKNH QFASAAKEEA EVDSIPLRLE SEILLHGQSQ ENAEILKGEL DLNCCPGREN 780 HAAPPRVSMM SLLQEASLPL ETYLRQNGLT SLVSEQQVAS PLGLSAGIQE HEEGSNEFSE 840 KDQRENDPS

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MESRVCMNGL CANSSNSVEW KKGWPLRSGG FATLCDDCGT AYEQLIFCET FHSEETGWRE  60
CTSCKKRLHC GCIASSSLLE LLDTGGVHCR GCSKSSKLPS TPLEEKHKAC GLSTDNGIDQ  120
NFDKMAPAQS DDNAQKDGQE HVPPSQNDDT TPRKLEEDFA GSGEIGFKLF SSFNQSSVVP  180
PKDQDTLRDS KSDGSEHKSL VQTNLSISLS ASSNLNTLPG AIAEERQLSA SISSFQQGCR  240
PRHVLPRLPN SILPAGLETN SSTITQLRVA RPPVEGRVKN QLLPRYWPRI TDQELQQISG  300
DSNSTIIPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QPEGLPLRIQ DVKGKEWIFQ  360
FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRMDPE GKLLMGFRKA SSTLSVQKDS  420
HYSMNSGAFQ GEQLLGNAEN LPMMSGYSGL LQSLKETRAS SMTLLSKHVY PGNISPHIIE  480
KNVSQSMGLP ERKRRNIGPK SKRLLIDGQD SLELRLSWEE VQEMLRPPPR VEPSTIMVED  540
HEFEEFEEPP VFGKRSIFIV RLSGEQEQWT QCDSCFKWRK VPIDFLLPHK WTCQDNVTDQ  600
MRSSCSAPDE LSSRELEILL RMNKDFTKRR VQTSLKQESQ DLETLTNAAP VGVETNEPGS  660
SSVGPTTKHP RHRPGCSCIV CIQPPSGKGK HKPTCVCNVC MTVKRRFKTL MMRKKKRQSE  720
REAEIAQKNH QFASAAKEEA EVDSIPLRLE SEILLHGQSQ ENAEILKGEL DLNCCPGREN  780
HAAPPRVSMM SLLQEASLPL ETYLRQNGLT SLVSEQQVAS PLGLSAGIQE HEEGSNEFSE  840
KDQRENDPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	704	715	KRRFKTLMMRKK
2	704	717	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein