PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21369.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 329aa    MW: 36409.5 Da    PI: 6.9023
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.95.5e-25132192259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++WrKYGqK++ ++++pr+YYrCt++   +C+++k+v++ ++dp ++ +tY+g+H+++
  PIN21369.1 132 EDGHAWRKYGQKVILNTKHPRNYYRCTHKfdqSCQATKQVQKIQDDPPLFRTTYHGHHTCK 192
                 7***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MATSSWVASG SSVPVDRERV IRELTRGRKI ADELRLRLRE TGVDGTAAAK VLPSQELVGK  60
IMDSFTQSIS ILSGGGDSDE VSQVPAVTNS PGRKSEDSGE SCKTPAPKDR RGCYKRRRTS  120
ETSIKDTPTL FEDGHAWRKY GQKVILNTKH PRNYYRCTHK FDQSCQATKQ VQKIQDDPPL  180
FRTTYHGHHT CKNLFKSSHQ ILVDPETQNS SIIWSFASRT ADYKPNKAAV INSSPAVNAA  240
IKQENKEVEH DHEQMKMKSS PPSDGDYIIS AELTAFDRNA TDPLGAFSSA SDHGDVLSSD  300
VYSCTASTHS MDVDMMGSVF DDFLELESL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-36WRKY family protein