PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21243.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 444aa MW: 48205.7 Da PI: 8.4094

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	204	248	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e+ PIN21243.1 204 DPEPGRCRRTDGKKWRCSREAVADQKYCERHMNRGRHRSRKPVES 248 79****************************************986 PP
2	QLQ	52.3	1.7e-18	137	172	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 ++FT++Q+ +L+ Q+l+yKy+ an+P+P++Ll +i+ PIN21243.1 137 GPFTPSQWIELELQALIYKYITANVPIPSYLLNPIR 172 59******************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MLNAFLISPS PFSSFMDFGV LGFDNLVCSN SDTADDVNKY GSGFLNQDRT VNQDDFRAFK 60 VPKTSSCNEA TVKLPLQRCN NGAILTESHQ QMLSFSSQTV ALPFYQQTSS AITRGPGYGY 120 GGLNGTSMYG VPSGVRGPFT PSQWIELELQ ALIYKYITAN VPIPSYLLNP IRIALESCGF 180 SRFSGLRTNA LGWGAFHPGF ANTDPEPGRC RRTDGKKWRC SREAVADQKY CERHMNRGRH 240 RSRKPVESQH GQSASRTNTT NATSAPVVPS GSASIVKQHN AHQDSSFGSV CSDSLLNPLN 300 TNSSFLNCRN YSTHGDLNDH EADRTRLSIS IPVVTSDFMS SSPANEKLTT SPSRLSRDPE 360 TTQMGLGPLG EVLHNNTNQS KNAMALNLID HWDHSPRVGS YPSLALRGTF GSGSRAESSK 420 ALDRDSFCSG LIGAGLILPT LPAS

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MLNAFLISPS PFSSFMDFGV LGFDNLVCSN SDTADDVNKY GSGFLNQDRT VNQDDFRAFK  60
VPKTSSCNEA TVKLPLQRCN NGAILTESHQ QMLSFSSQTV ALPFYQQTSS AITRGPGYGY  120
GGLNGTSMYG VPSGVRGPFT PSQWIELELQ ALIYKYITAN VPIPSYLLNP IRIALESCGF  180
SRFSGLRTNA LGWGAFHPGF ANTDPEPGRC RRTDGKKWRC SREAVADQKY CERHMNRGRH  240
RSRKPVESQH GQSASRTNTT NATSAPVVPS GSASIVKQHN AHQDSSFGSV CSDSLLNPLN  300
TNSSFLNCRN YSTHGDLNDH EADRTRLSIS IPVVTSDFMS SSPANEKLTT SPSRLSRDPE  360
TTQMGLGPLG EVLHNNTNQS KNAMALNLID HWDHSPRVGS YPSLALRGTF GSGSRAESSK  420
ALDRDSFCSG LIGAGLILPT LPAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-54	GRF family protein