PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21241.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 311aa    MW: 34488.5 Da    PI: 7.3261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.2e-11161209355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L+el+P +    +k   Ka++L + ++Y++sLq
  PIN21241.1 161 NSHSLAERVRRERISERMRMLQELVPGC----NKITGKAMMLDEIINYVQSLQ 209
                 58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MGFEENGVDL FYGSNWDPFV SLSQSGSFAN STMVPQNAFS NPNLLQNPSH LVHLPSDSVL  60
PTIPSFGSGS LSEMVSSFGP SNFAQKSCQN SEVVKRKRKV SLQAPSKNHE EEHQKDPSET  120
HGNKQKSEQN IGKQGKDNSV GGEASKENYI HVRAKRGQAT NSHSLAERVR RERISERMRM  180
LQELVPGCNK ITGKAMMLDE IINYVQSLQQ QVEFLSMKLA TVNPELNVDL DRILSKDSLW  240
PPGLSSSHPF PPYPQGTFNG TPGTTAPFHS LPQHIWNSDL QGILQMGFDP DASVTNLQPN  300
DCPRWSCRTK N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196126RKRKVSLQAPSKNHEEEHQKDPSETHGNKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.16e-57bHLH family protein