PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN21125.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | C2H2 | ||||||||
Protein Properties | Length: 258aa MW: 29715.9 Da PI: 8.1663 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.8e-05 | 9 | 34 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp dC+++F+ + n++rH + H PIN21125.1 9 FECPveDCKRRFTIQGNMTRHVKEfH 34 89********************9988 PP | |||||||
2 | zf-C2H2 | 17.2 | 1.4e-05 | 48 | 72 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk+F+ s L++H +H PIN21125.1 48 YVCSehGCGKVFKYLSKLHKHEDSH 72 89*99****************9888 PP | |||||||
3 | zf-C2H2 | 18.8 | 4.5e-06 | 139 | 163 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C+ +Fs+ snL++Hi+ H PIN21125.1 139 KCSveGCSLTFSTASNLNQHIKAvH 163 789999***************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MLQHQGKLFE CPVEDCKRRF TIQGNMTRHV KEFHGESDSA NVKHPKEYVC SEHGCGKVFK 60 YLSKLHKHED SHVKLESVEA FCAEPGCMKY FTNEQCLKEH IWSCHQHVIC DKCGTKQLKK 120 NIKRHIRMHE AGVSSERIKC SVEGCSLTFS TASNLNQHIK AVHLELKPFT CSIPGCNMKF 180 AFKHVRDNHE KSGCHVYTVG DFVESDEQFR SRPRGGRKRK CPTIETLMRK RVVPPSESDL 240 DVDEVHDHLS WLHSAESE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 212 | 220 | RPRGGRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.1 | 1e-103 | C2H2 family protein |