PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21066.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 721aa MW: 77453.6 Da PI: 6.366

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.9	3.1e-31	303	360	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkg e+prsYY+Ct+++Cpvkkkvers +++++ei+Y+g Hnh+k PIN21066.1 303 EDGYNWRKYGQKQVKGREHPRSYYKCTHPDCPVKKKVERSY-EGHITEIIYTGAHNHPK 360 8**************************************.*************85 PP
2	WRKY	103.5	1.2e-32	512	570	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+ PIN21066.1 512 LDDGYRWRKYGQKVVRGNPNPRSYYKCTSPGCNVRKHVERASHDLKSVITTYEGKHNHD 570 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MGGLDDHAAI MGDSMPPSPS PRTFFSSVIS DDAAAPSFAD SGNENKSGPI FSLPEGQGPS 60 VNVDQNNLSP ASISGDEASN SNALPEPKTG SRGGLVERLA ARAGFNAPRL NTENIRPADL 120 SKNPEVRSPY LTIPLGLSPT TLLDSPVFLA NSLVQPSPTT GKFSFAPSGN NGNSALMAND 180 SDKGKQNTFE DTSSFAFKPL ADSSSNPHFN VANKVQTSNF APQSFGVSSH SDASLQQPRV 240 EPPRVQTLTD SHAEKNRGSN LSSEQTYNPI GAAENSPPFD EPHEDDGDQR SSRDPNVGGG 300 QAEDGYNWRK YGQKQVKGRE HPRSYYKCTH PDCPVKKKVE RSYEGHITEI IYTGAHNHPK 360 PPPNRRSSLG SSNAFGDVQL ESEQPGTGEN GNLVWSSMQK GNISGGPDWS QENVEATTSA 420 IHEYGNGATF QAQSGAQNET GDGVDRSSTF SNDEEDDRVT HGSVSLGYDG EGDDSESKRR 480 RIDTYASDMS GATRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTS 540 PGCNVRKHVE RASHDLKSVI TTYEGKHNHD VPAARNSSHG NSGGGSNTLL TQQTPAPATS 600 SHIHRPEPSQ IHSNTARFER PPLGPYSLPG RPQLEPGPGF GFGMNQSGLA GLGLARLGPN 660 QGKLPMLPVH HQARPMNNMG FMLPKAELKL EPLTTDSGLN SSDGSSVYQQ FMNKLPLGPQ 720 M

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MGGLDDHAAI MGDSMPPSPS PRTFFSSVIS DDAAAPSFAD SGNENKSGPI FSLPEGQGPS  60
VNVDQNNLSP ASISGDEASN SNALPEPKTG SRGGLVERLA ARAGFNAPRL NTENIRPADL  120
SKNPEVRSPY LTIPLGLSPT TLLDSPVFLA NSLVQPSPTT GKFSFAPSGN NGNSALMAND  180
SDKGKQNTFE DTSSFAFKPL ADSSSNPHFN VANKVQTSNF APQSFGVSSH SDASLQQPRV  240
EPPRVQTLTD SHAEKNRGSN LSSEQTYNPI GAAENSPPFD EPHEDDGDQR SSRDPNVGGG  300
QAEDGYNWRK YGQKQVKGRE HPRSYYKCTH PDCPVKKKVE RSYEGHITEI IYTGAHNHPK  360
PPPNRRSSLG SSNAFGDVQL ESEQPGTGEN GNLVWSSMQK GNISGGPDWS QENVEATTSA  420
IHEYGNGATF QAQSGAQNET GDGVDRSSTF SNDEEDDRVT HGSVSLGYDG EGDDSESKRR  480
RIDTYASDMS GATRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTS  540
PGCNVRKHVE RASHDLKSVI TTYEGKHNHD VPAARNSSHG NSGGGSNTLL TQQTPAPATS  600
SHIHRPEPSQ IHSNTARFER PPLGPYSLPG RPQLEPGPGF GFGMNQSGLA GLGLARLGPN  660
QGKLPMLPVH HQARPMNNMG FMLPKAELKL EPLTTDSGLN SSDGSSVYQQ FMNKLPLGPQ  720
M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	478	482	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-170	WRKY family protein