PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20959.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 241aa    MW: 25426 Da    PI: 4.7655
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.7e-194797155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr ++ +g+Wv+eIr p++   + r++lg++ tae+Aa+a++ a+++++g
  PIN20959.1 47 PVYRGVRMRS-WGKWVSEIRQPKK---KSRIWLGTYPTAEMAARAHDVAALSIKG 97
                68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAESASSDAD AGAAADSSTS EEKEKSAFEN NEKNCKKRPR DSGHKHPVYR GVRMRSWGKW  60
VSEIRQPKKK SRIWLGTYPT AEMAARAHDV AALSIKGNSA ILNFPQLSES LPRPASLSPR  120
DVQAAAAKAA AMEELSTVCG GTSSSGASCS SSTATSASVS SPSCEANAGS DELGEIIELP  180
SLEGNYDSTK SGSELAVVDS VEGWLQPPWW ASDRDFSEYF LDQLAGGGGG SLIPCSFEIL  240
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-58ERF family protein