PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20878.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 433aa MW: 47106.5 Da PI: 6.8019

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.9	7.4e-34	37	154	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++++c+ +s s +++ +++ PIN20878.1 37 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAQLPAWHPTNCSGASASFEQEDVRKNleeehqqqrtgi 135 79**************************************************************77777777333333333311111111112223444 PP TCP 89 ..................k 89 PIN20878.1 136 nrddlvvtsvsgpsskraM 154 4555555555554443330 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGESSHHHHP TSSRLGLRNS AGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLA 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDELAQL PAWHPTNCSG ASASFEQEDV 120 RKNLEEEHQQ QRTGINRDDL VVTSVSGPSS KRAMTMVGGE EEQQNLHQGG NENNTNGQNS 180 SFLPPSLDSD AIADTIKSFF PMGASNEASS SAMEFQNFPT PHLLSRNSSN SQDLRLSLQS 240 FQDPVMLQHH NQQNHQNPTH HTEQTHSQTH VLLSGTPLGF DGNAGWPEHH HQVAEFGRFQ 300 RLAPWNTGGD TAGGSGGAAA GYLFNSPPPT LQQLLGHNQF LSQRGPLQSS NTPSVRAWMD 360 PSAIAIATAD HSQHHHLHPS FVPMYPSSMS GIGFASGAGG FSGFHIPARI QGDEEEHDGY 420 SEKPSSASSD SRH

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGESSHHHHP TSSRLGLRNS AGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLA  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDELAQL PAWHPTNCSG ASASFEQEDV  120
RKNLEEEHQQ QRTGINRDDL VVTSVSGPSS KRAMTMVGGE EEQQNLHQGG NENNTNGQNS  180
SFLPPSLDSD AIADTIKSFF PMGASNEASS SAMEFQNFPT PHLLSRNSSN SQDLRLSLQS  240
FQDPVMLQHH NQQNHQNPTH HTEQTHSQTH VLLSGTPLGF DGNAGWPEHH HQVAEFGRFQ  300
RLAPWNTGGD TAGGSGGAAA GYLFNSPPPT LQQLLGHNQF LSQRGPLQSS NTPSVRAWMD  360
PSAIAIATAD HSQHHHLHPS FVPMYPSSMS GIGFASGAGG FSGFHIPARI QGDEEEHDGY  420
SEKPSSASSD SRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-93	TCP family protein