PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20781.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 245aa MW: 27939.7 Da PI: 8.7465

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00032	97	119	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H + H PIN20781.1 97 SCSVCSRVYPTSRLLSIHVSEvH 119 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAMDVEESGN GFNFPCWKPI RRRFGPDAPF FAAGNIEREL LAKQVALELT EEEKQQIQGD 60 VEYCGGSEVF CPVVGCGAFL KSLEDFEDHY NARHMASCSV CSRVYPTSRL LSIHVSEVHD 120 SFFQAKVARG FAMYECLVEG CDTKLKSYNS RRQHLIDKHK FPSSFEFFKK ARTSKKQRQK 180 VQRKQALHRT EQPSTAMQVE EENIDSLVSA VSRLSTSDSP SSISFGRRHT RGLTFVPRAI 240 QKERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-101	C2H2 family protein