PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20754.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Dof

Protein Properties

Length: 346aa MW: 37732.1 Da PI: 8.6135

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.6e-39	35	94	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e alkcprCds ntkfCyynnysl+qPr+fCk+CrryWt+GGalrnvP+Ggg+rknkk++ PIN20754.1 35 EPALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTRGGALRNVPIGGGCRKNKKMK 94 6789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAPNQNNSAL AAKPAGKDES KNSTSRKTSS ARPQEPALKC PRCDSPNTKF CYYNNYSLTQ 60 PRHFCKTCRR YWTRGGALRN VPIGGGCRKN KKMKSSQRLS GDSKDSSGSS DVGGLKFFQG 120 LLPAMDFQLG GINIPRLHTP NTSIFNQFSS FGDISATSCG NINISSSSPC FSLDTSGTPS 180 PLMGLSSFPS LKQRDGAPSG FQLQEMGCVD VHSNLASSIE SLSCINQDLH WKLQQQRLAM 240 MFAGDNQKEN SSTISTAAIE PLIQRPEPIL FQNILDNSKT ESCLIGTSRK EGENANLSTE 300 WFFDNSYANV TPTPATSTSN SVNDNMISNW NGIQAWSELT RYTSLP

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAPNQNNSAL AAKPAGKDES KNSTSRKTSS ARPQEPALKC PRCDSPNTKF CYYNNYSLTQ  60
PRHFCKTCRR YWTRGGALRN VPIGGGCRKN KKMKSSQRLS GDSKDSSGSS DVGGLKFFQG  120
LLPAMDFQLG GINIPRLHTP NTSIFNQFSS FGDISATSCG NINISSSSPC FSLDTSGTPS  180
PLMGLSSFPS LKQRDGAPSG FQLQEMGCVD VHSNLASSIE SLSCINQDLH WKLQQQRLAM  240
MFAGDNQKEN SSTISTAAIE PLIQRPEPIL FQNILDNSKT ESCLIGTSRK EGENANLSTE  300
WFFDNSYANV TPTPATSTSN SVNDNMISNW NGIQAWSELT RYTSLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	4e-65	Dof family protein