PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YB | ||||||||
Protein Properties | Length: 158aa MW: 17841.1 Da PI: 8.4603 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 42.7 | 1.4e-13 | 18 | 115 | 5 | 97 |
NF-YB 5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 ++lP + v r++k+ l +++ is +d+ + e + fi ++++ a+d c++ +r+ in++d++ al ++ f++++ pl++ l+++r+ +++k PIN20738.1 18 AEELPKTIVRRLVKEKLSqlsSDSDISvlRDSLQAFSESARIFIHYLSATANDICKESNRQIINAEDVFKALEEIEFQEFIGPLRASLEEFRQKNAAK 115 567999999999998765111566666447999***********************************************************987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MAAKENDKGL TEKVVSEAEE LPKTIVRRLV KEKLSQLSSD SDISVLRDSL QAFSESARIF 60 IHYLSATAND ICKESNRQII NAEDVFKALE EIEFQEFIGP LRASLEEFRQ KNAAKKAASL 120 GSSKTKDTNE KAKRKEQPAK GEGRKKRREV EKNDDNEV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 148 | KRKEQPAKGEGRKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 3e-39 | NF-YB family protein |