PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 19708.2 Da PI: 5.8559 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 81 | 131 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k r +lg++ t+eeAa a+++a+ kl+g PIN20675.1 81 RYRGVRRRP-WGKFAAEIRDP---DrKGSRLWLGTYETPEEAALAYDRAAFKLRG 131 7********.**********8...3245*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MEGILSEMDL AFLDSIQDYL LSDFDFSQDL LCDNIATPVS DDDQISSEMV EELLCNNNGD 60 TGEVDAPPKS VSQAPQVEWR RYRGVRRRPW GKFAAEIRDP DRKGSRLWLG TYETPEEAAL 120 AYDRAAFKLR GTKARVNFPH LVGSGVPEPT RVTKRSHSSM ARLNVRSKKM KMAVA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 153 | 160 | TKRSHSSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-33 | ERF family protein |