PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 27265.1 Da PI: 8.7251 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44 | 4e-14 | 68 | 120 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ah +Er+RR+++ + +++Lr+llP+ +K s ++ +Av+YIk+++ PIN20434.1 68 KKSAHRDIERQRRKEMATLYATLRSLLPTeY---ITGKRSTSDHMHEAVKYIKYME 120 689**************************77...9******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MNTPSITENL SLESLGVLHS NELLEQELSV NNAFVESSNP NKKRRRASKS GNCQGNNIDE 60 QNCDCNLKKS AHRDIERQRR KEMATLYATL RSLLPTEYIT GKRSTSDHMH EAVKYIKYME 120 RNIEELRMRK DKLKKLYKSN GSFQNGSSNS VNFPKCVTVN YCLGGVEIII SCGLKKKDGF 180 PLSRVLVELI EIGHDIVSCI SSKANDRIIY RIQSQVNDWI TCIDLSELQQ RLANMVDFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 135 | MRKDKLKK |
2 | 131 | 136 | DKLKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 2e-40 | bHLH family protein |