PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20423.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 277aa    MW: 30959.6 Da    PI: 5.218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-183584255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  PIN20423.1 35 KFIGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 84
                789******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEIQFQQQQK LVKIPPNKTS KMKGRRNKST PANNKFIGVR QRPSGRWVAE IKDTTQKIRM  60
WLGTFETAEE AARAYDEAAC LLRGSNTRTN FVTQVSPNSP LASRVRNLLN SKKHAKAKQQ  120
SQESCPSTNH EDIEASTASA GSDYSSLTWT SSPCVVETFS SGKMQDCSQL LDDVYRPDLS  180
NCTSEVDAGS ADCGAASAWG FDGFSFTQEL LELPRDHVVL SENISVVEYF SEFERMKVER  240
QISASLYAIN GLNEYMESVY DPTEALWDLP PIYPLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-38ERF family protein