PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20341.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 367aa MW: 40248.9 Da PI: 8.0791

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.6e-41	145	221	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gC++dls+ k+yh+rhkvC+vhsk++vv+v+g++qrfCqqCsrfh l efDe+krsCr+ La+hn+rrrk++ PIN20341.1 145 TCQVHGCNKDLSSSKDYHKRHKVCDVHSKTAVVIVNGIKQRFCQQCSRFHVLAEFDEGKRSCRKSLAGHNQRRRKPH 221 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEPLSYGFEG RGLLFTDDTD FQDDGLMRSR NLSKKWDAAE NVGFVESVLP VIPKKSVFGN 60 QFLESFGDEP NDPSNKSILS TSTVTLNSLM EFSCSMNKGN DENLPASREA KGSRFSLESS 120 VLSTSGPSAS GKRARTTNLQ SQTPTCQVHG CNKDLSSSKD YHKRHKVCDV HSKTAVVIVN 180 GIKQRFCQQC SRFHVLAEFD EGKRSCRKSL AGHNQRRRKP HFDSHLGSTY FTTDSSKTSL 240 FLSEILPGGF FGLGKLGQNP SGNFLNSPLS VPESLLGSNS NRALSLLSAH SQNLSSYSAN 300 SLVKSMSDQE LGFKAPQDEL SQEPNASNSK NYLSSEGVNT VDLIELSLHL QRVEQLKYSA 360 QVKLEGL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEPLSYGFEG RGLLFTDDTD FQDDGLMRSR NLSKKWDAAE NVGFVESVLP VIPKKSVFGN  60
QFLESFGDEP NDPSNKSILS TSTVTLNSLM EFSCSMNKGN DENLPASREA KGSRFSLESS  120
VLSTSGPSAS GKRARTTNLQ SQTPTCQVHG CNKDLSSSKD YHKRHKVCDV HSKTAVVIVN  180
GIKQRFCQQC SRFHVLAEFD EGKRSCRKSL AGHNQRRRKP HFDSHLGSTY FTTDSSKTSL  240
FLSEILPGGF FGLGKLGQNP SGNFLNSPLS VPESLLGSNS NRALSLLSAH SQNLSSYSAN  300
SLVKSMSDQE LGFKAPQDEL SQEPNASNSK NYLSSEGVNT VDLIELSLHL QRVEQLKYSA  360
QVKLEGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-48	SBP family protein