PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20111.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 280aa    MW: 30895.3 Da    PI: 10.5633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.5e-12175220454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h+  + +RRd+iN+++  L++l+P++     +K +K+++L +++eY+ksL
  PIN20111.1 175 VHKLSDTKRRDKINKRLRALQDLIPNC-----TKRDKVSVLDETIEYLKSL 220
                 5888888********************.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGTLDSAKNS NKKKKALTNC LIQRNKIQGV CGKNCSSPTV KLTNRDHITH AKLHTKATTL  60
INAFTFQTEF QPAQPNSRLS DAHDTSPDQQ CNTVKDNFST FTASTKLKLH NGTSLEPART  120
ASSESSPCAP FNPNKINTKG YYRQAGDSES HCNANGESNT LATAKGVKRK RAAQVHKLSD  180
TKRRDKINKR LRALQDLIPN CTKRDKVSVL DETIEYLKSL RLQLQIMPIF AGLCVPSTQM  240
MSPSPAYYPT VGSSIALTFG MAAGFPGHRT RLQMLIPHHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-28bHLH family protein