PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 257aa MW: 27889.8 Da PI: 10.2657 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94.6 | 8.4e-30 | 75 | 129 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +v+Y eClkNhAa++Gg+a+DGCgEfm+ geegt +alkC+AC+CHRnFHR+ ++ PIN20026.1 75 GVKYTECLKNHAAAIGGNATDGCGEFMAG-GEEGTLEALKCSACNCHRNFHRKIHV 129 699*************************9.999*******************9765 PP | |||||||
2 | Homeobox | 15.2 | 3.8e-05 | 190 | 246 | 1 | 53 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRa 53 +r Rt+ft+eq e + + e k ++++ +e ++ +++g++ ++ kvW +N ++ PIN20026.1 190 KRFRTKFTQEQKEKMLGFAEkagwKLQKLDDSEVRRFCQEIGIKRKVLKVWMHNNKY 246 789***********977555666689****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MSISSQGPKP LVAALPTNTP MPSPSIDHQA GKSSTDIVLR TAAAPSNVNV HPRSPGLEDG 60 HVMMNKSFIK QSSAGVKYTE CLKNHAAAIG GNATDGCGEF MAGGEEGTLE ALKCSACNCH 120 RNFHRKIHVH TEPASSNSRR YPSASAPACA KKSNTIYSGG AKLGLAAGNQ LTYKPKSMEG 180 EGQLLGEVKK RFRTKFTQEQ KEKMLGFAEK AGWKLQKLDD SEVRRFCQEI GIKRKVLKVW 240 MHNNKYNLSK KTNTSTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 4e-60 | ZF-HD family protein |