PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19938.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 237aa    MW: 26812.6 Da    PI: 6.9283
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-1165111354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+Er+RR+riN  +++Lr ll  +      K +Ka+ L k+v+ +++L
  PIN19938.1  65 ENHKEAERKRRERINGHLDRLRALLLCN-----SKTDKASLLAKVVQRVREL 111
                 68*************************8.....7************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MQPENSPEFS LFDQLFAGNG LNGGYPAAQS SFCSSSFFPM EMLEFSDDHQ TNKADRQARA  60
FAASENHKEA ERKRRERING HLDRLRALLL CNSKTDKASL LAKVVQRVRE LKQQTSEIMQ  120
LDQTFPSEAD EITVLQNHDS VDGKSIVKAS LCCEDRVDLI TDLIEILKPL PLSPLRAEMA  180
TMGGRMRNVI VLAGDKDQTD ESVLLLRDAL KTLVLRSSYV ADQRSKRRRM LDQMILR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17176ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.12e-58bHLH family protein