PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19909.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24729.4 Da PI: 4.8713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.3e-17 | 63 | 113 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + kr++lg++ +e+Aa+a++ a+++l+g PIN19909.1 63 PVYRGVRRRD-SNKWVCELREPI----KqKRIWLGTYPNPEMAARAHDVAALALRG 113 68*****999.7*********72....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MENYSPTSNS DPYSFQIPSR DFSETTSSTG RARSHSDEEA VILAASRPKK RAGRKKFKET 60 RHPVYRGVRR RDSNKWVCEL REPIKQKRIW LGTYPNPEMA ARAHDVAALA LRGQMACLNF 120 ADSVWRLPIP ASTDAKDLRK AAVEAAEAFR PTAGGEEVEQ EERNEDNEGE KEAFLEGYED 180 FSVEGLADGV LLSPPPCWGR SNFSWDEVES DAEVELWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 6e-48 | ERF family protein |