PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19879.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 298aa    MW: 35276.8 Da    PI: 8.1192
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix803.3e-2532114186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e++ ++ ++k++kplWe +s +m+e+g++rs++qCk+kw+nl +ryk ++++e ++    ++++p++++l+
  PIN19879.1  32 QWSIQETRDFLVIRAELDPTFMETKRNKPLWEVISTRMKEKGYSRSAEQCKCKWKNLVTRYKGCETMEAEG---MRQQFPFYSELQ 114
                 7********************************************************************97...56679***9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDPGHHHQHH HHQLHQQYSI ETVSSSGDRF PQWSIQETRD FLVIRAELDP TFMETKRNKP  60
LWEVISTRMK EKGYSRSAEQ CKCKWKNLVT RYKGCETMEA EGMRQQFPFY SELQTIFAAR  120
MQRMLWLEAE GAGAATPTLA QTPTPTTSTA TTSRKKPGTA HLYVSSDEED DQNDDSDGGG  180
PKKKRKTIKG NHTNTPNITN SNMMIINGIR EVMEEFTKQQ MQIEMQWLKA YEEKEEERRL  240
KEMEWRQRME ALENERIMME RRWREREEQR KIREEARAEK RDALITALLN KLRREDSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-55Trihelix family protein